Basic Information
Locus ID:
STRG.3780_chr02_-
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
proteinaceous RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 102074960 | 102083711 | - | STRG.3780_chr02_- |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.86 | 62,456.03 Da | 42.25 | 75.95 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16953 | Protein-only RNase P | 260 | 487 | 2.6E-61 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 14 | 219 | 5.6E-75 | IPR033443 |
| Gene3D | G3DSA:3.40.50.11980 | - | 278 | 453 | 1.3E-209 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 19 | 490 | 1.3E-209 | IPR011990 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 525 | 551 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16650.1 | proteinaceous RNase P 2. | 0 |
| RefSeq | XP_021845485.1 | proteinaceous RNase P 2-like [Spinacia oleracea] | 0 |
| Q680B9 | Proteinaceous RNase P 2 OS=Arabidopsis thaliana OX=3702 GN=PRORP2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LD46 | ribonuclease P OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology