Basic Information
Locus ID:
STRG.3697_chr02_-
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 98220406 | 98246684 | - | STRG.3697_chr02_- |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 97,730.55 Da | 45.31 | 72.78 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15539 | PHD1_AIRE | 521 | 561 | 1.78114E-17 | - |
| Pfam | PF00628 | PHD-finger | 522 | 563 | 7.1E-8 | IPR019787 |
| Pfam | PF16135 | Tify domain binding domain | 260 | 315 | 2.2E-16 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 462 | 504 | 2.6E-13 | IPR032308 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 605 | 661 | 1.5E-8 | IPR011011 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 499 | 563 | 3.91E-16 | IPR011011 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 753 | 847 | 1.31E-6 | IPR016181 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 606 | 666 | 3.8E-12 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 514 | 579 | 5.2E-18 | IPR013083 |
| Gene3D | G3DSA:3.40.630.30 | - | 705 | 872 | 2.6E-7 | - |
| SMART | SM00249 | PHD_3 | 608 | 663 | 5.3E-4 | IPR001965 |
| SMART | SM00249 | PHD_3 | 521 | 562 | 3.0E-11 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 519 | 564 | 10.593599 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 522 | 561 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 404 | 419 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 126 | 177 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 374 | 419 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 135 | 153 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27980.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_028064136.1 | uncharacterized protein LOC114267301 isoform X1 [Camellia sinensis] | 0 |
| Q6PDQ2 | Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A1WUJ7 | Chromodomain-helicase-DNA-binding protein 4 OS=Morella rubra OX=262757 GN=CJ030_MR1G020868 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology