Basic Information
Locus ID:
STRG.30820_chr10_-
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 94541013 | 94551972 | - | STRG.30820_chr10_- |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 199,235.44 Da | 48.12 | 75.96 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 384 | 656 | 1.863E-131 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1497 | 1760 | 4.00506E-153 | IPR044769 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1536 | 1702 | 8.1E-34 | IPR002498 |
| Pfam | PF01363 | FYVE zinc finger | 33 | 100 | 5.0E-17 | IPR000306 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 405 | 643 | 1.4E-32 | IPR002423 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 450 | 622 | 9.0E-42 | IPR027409 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 31 | 103 | 3.5E-20 | IPR011011 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1495 | 1760 | 1.57E-80 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1467 | 1617 | 1.2E-36 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1620 | 1761 | 2.5E-42 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 449 | 622 | 1.0E-52 | IPR027409 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 22 | 104 | 3.5E-21 | IPR013083 |
| SMART | SM00064 | fyve_4 | 28 | 103 | 6.5E-21 | IPR000306 |
| SMART | SM00330 | PIPK_2 | 1466 | 1761 | 6.6E-127 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 36 | 102 | 13.150046 | IPR017455 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1435 | 1760 | 59.338051 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1195 | 1235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 339 | 371 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1189 | 1238 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 830 | 851 | - | - |
| Coils | Coil | Coil | 1093 | 1113 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_034696881.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B [Vitis riparia] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A2N9FZU0 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23948 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology