Basic Information
Locus ID:
STRG.29428_chr10_-
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Short Name:
WRKY4
Description:
WRKY Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 4550162 | 4556798 | - | STRG.29428_chr10_- |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.42 | 55,356.30 Da | 53.47 | 50.26 | -0.90 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 215 | 270 | 1.1E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 391 | 448 | 1.2E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 212 | 272 | 1.96E-25 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 382 | 450 | 1.31E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 375 | 451 | 4.3E-36 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 207 | 273 | 2.5E-27 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 390 | 449 | 6.5E-40 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 214 | 272 | 8.9E-37 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 385 | 450 | 37.96386 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 215 | 273 | 23.020283 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 360 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 377 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 361 | 377 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 190 | 214 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 338 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 190 | 205 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_028111113.1 | probable WRKY transcription factor 3 isoform X1 [Camellia sinensis] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | J9ZZY2 | WRKY transcription factor 8 OS=Tamarix hispida OX=189793 GN=WRKY8 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology