Basic Information
Locus ID:
STRG.28767_chr04_-
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 128671103 | 128674932 | - | STRG.28767_chr04_- |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 54,715.06 Da | 47.40 | 82.72 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 368 | 439 | 1.9E-20 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 30 | 349 | 5.8E-78 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 30 | 350 | 1.96E-80 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 364 | 460 | 5.3E-11 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 29 | 357 | 2.1E-113 | - |
| SMART | SM00768 | X8_cls | 367 | 452 | 1.7E-46 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021728822.1 | glucan endo-1,3-beta-glucosidase 4-like [Chenopodium quinoa] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RV46 | X8 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_032040 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology