Basic Information
Locus ID:
STRG.28740_chr04_-
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Casein Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 128281464 | 128291489 | - | STRG.28740_chr04_- |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.31 | 80,619.65 Da | 43.62 | 71.46 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14016 | STKc_CK1 | 154 | 429 | 7.1403E-129 | - |
| Pfam | PF00069 | Protein kinase domain | 154 | 387 | 3.1E-17 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 154 | 440 | 2.32E-58 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 137 | 474 | 1.1E-80 | - |
| SMART | SM00220 | serkin_6 | 154 | 452 | 6.8E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 154 | 439 | 24.188234 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 280 | 292 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 160 | 192 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 105 | 144 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 83 | - | - |
| Coils | Coil | Coil | 91 | 111 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13670.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_010257513.1 | PREDICTED: casein kinase 1-like protein HD16 [Nelumbo nucifera] | 0 |
| Q852L0 | Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J5AFB1 | Protein kinase domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_035602 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology