Basic Information
Locus ID:
STRG.28466_chr04_-
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 122938456 | 122943149 | - | STRG.28466_chr04_- |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.46 | 30,175.57 Da | 40.34 | 66.45 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 20 | 270 | 5.6E-87 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 157 | 260 | 1.77E-19 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 156 | 273 | 1.4E-40 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 161 | 261 | 21.34461 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 88 | 112 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_022719142.1 | auxin-responsive protein IAA16-like [Durio zibethinus] | 0 |
| O24407 | Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2N9FZI3 | Auxin-responsive protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20203 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology