Basic Information
Locus ID:
STRG.27891_chr04_-
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 111611267 | 111626079 | - | STRG.27891_chr04_- |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.61 | 136,161.30 Da | 43.90 | 69.96 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 190 | 285 | 5.69877E-41 | - |
| CDD | cd13999 | STKc_MAP3K-like | 956 | 1213 | 5.6791E-111 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 950 | 1213 | 1.8E-62 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 203 | 285 | 9.4E-19 | IPR000270 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 942 | 1212 | 2.11E-76 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 202 | 288 | 4.21E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1038 | 1229 | 2.0E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 943 | 1037 | 3.5E-25 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 205 | 286 | 7.5E-11 | - |
| SMART | SM00220 | serkin_6 | 950 | 1216 | 1.2E-56 | IPR000719 |
| SMART | SM00666 | PB1_new | 201 | 287 | 9.1E-27 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 950 | 1216 | 40.569538 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1075 | 1087 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 956 | 981 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1140 | 1162 | 5.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1069 | 1087 | 5.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1184 | 1206 | 5.1E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1032 | 1045 | 5.1E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 589 | 605 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 889 | 905 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 869 | 888 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 493 | 514 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 589 | 613 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 680 | 732 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 708 | 732 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 863 | 905 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35050.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_021300209.1 | uncharacterized protein LOC110428648 [Herrania umbratica] | 0 |
| O64768 | RAF-like serine/threonine-protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=RAF24 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P5BJY6 | Mitogen-activated protein kinase kinase kinase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_232570 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology