Basic Information
Locus ID:
STRG.21325_chr09_-
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 91054192 | 91056084 | - | STRG.21325_chr09_- |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.23 | 42,969.12 Da | 59.54 | 76.47 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06623 | PKc_MAPKK_plant_like | 84 | 346 | 7.50575E-137 | - |
| Pfam | PF00069 | Protein kinase domain | 88 | 341 | 1.1E-62 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 85 | 347 | 2.97E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 60 | 165 | 7.4E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 166 | 348 | 1.5E-48 | - |
| SMART | SM00220 | serkin_6 | 86 | 341 | 5.1E-84 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 86 | 341 | 44.597729 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 92 | 115 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 199 | 211 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 84 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 356 | 394 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 356 | 381 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21220.1 | MAP kinase kinase 5. Encodes a mitogen-activated kinase kinase, dual specific protein kinase that is expressed in vegetative tissues and floral buds. Involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK4.In plants with both MKK5 and MKK6 levels reduced by RNAi plants, floral organs do not abscise suggestion a role for both proteins in mediating floral organ abscission. | 0 |
| RefSeq | XP_023761992.1 | mitogen-activated protein kinase kinase 5 [Lactuca sativa] | 0 |
| Q8RXG3 | Mitogen-activated protein kinase kinase 5 OS=Arabidopsis thaliana OX=3702 GN=MKK5 PE=1 SV=2 | 0 | |
| TrEMBL | A0A7C8YP09 | Mitogen-activated protein kinase kinase OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology