Basic Information
Locus ID:
STRG.19490_chr07_-
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
11S globulin seed storage protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 93541473 | 93544987 | - | STRG.19490_chr07_- |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 38,877.01 Da | 36.36 | 90.03 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02242 | cupin_11S_legumin_N | 5 | 177 | 5.3613E-50 | - |
| Pfam | PF00190 | Cupin | 12 | 126 | 1.0E-17 | IPR006045 |
| Pfam | PF00190 | Cupin | 202 | 338 | 4.9E-18 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 13 | 342 | 4.24E-34 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 198 | 357 | 1.3E-34 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 7 | 182 | 5.4E-29 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 3 | 161 | 2.5E-14 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 194 | 342 | 1.4E-16 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 279 | 294 | 2.3E-9 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 213 | 233 | 2.3E-9 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 261 | 277 | 2.3E-9 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 297 | 315 | 2.3E-9 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 319 | 336 | 2.3E-9 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_034701799.1 | glutelin type-A 3-like [Vitis riparia] | 0 |
| Q9XHP0 | 11S globulin seed storage protein 2 OS=Sesamum indicum OX=4182 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X8ANJ1 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_006624 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology