Basic Information
Locus ID:
STRG.18923_chr07_-
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 79962947 | 79964103 | - | STRG.18923_chr07_- |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.57 | 24,209.36 Da | 38.48 | 72.26 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 49 | 182 | 6.19936E-54 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 49 | 183 | 1.6E-35 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 39 | 183 | 1.01E-45 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 28 | 182 | 1.0E-58 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 49 | 183 | 3.0E-46 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 38 | 183 | 56.385689 | IPR001229 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 200 | 221 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 201 | 221 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G73040.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_006426466.1 | jacalin-related lectin 19 [Citrus clementina] | 0 |
| Q9SSM3 | Jacalin-related lectin 19 OS=Arabidopsis thaliana OX=3702 GN=JAL19 PE=2 SV=1 | 0 | |
| TrEMBL | V4SRG5 | Jacalin-type lectin domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10026553mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology