Basic Information
Locus ID:
STRG.18394_chr09_-
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr09 | 61997208 | 62002246 | - | STRG.18394_chr09_- |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.49 | 63,696.55 Da | 57.36 | 56.72 | -1.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04795 | PAPA-1-like conserved region | 424 | 508 | 6.2E-19 | IPR006880 |
| Pfam | PF04438 | HIT zinc finger | 526 | 557 | 1.2E-7 | IPR007529 |
| SMART | SM01406 | PAPA_1_2 | 424 | 509 | 1.3E-25 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 104 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 55 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 160 | 180 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 415 | 481 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 352 | 367 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 199 | 213 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 287 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 105 | 125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 129 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 321 | 367 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 400 | 482 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 160 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 231 | - | - |
| Coils | Coil | Coil | 462 | 483 | - | - |
| Coils | Coil | Coil | 413 | 450 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47350.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_021770059.1 | protein IWS1 homolog [Chenopodium quinoa] | 0 |
| TrEMBL | A0A6P4AC14 | uncharacterized protein LOC107426162 OS=Ziziphus jujuba OX=326968 GN=LOC107426162 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology