Basic Information
Locus ID:
STRG.1619_chr01_-
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr01 | 95027408 | 95042983 | - | STRG.1619_chr01_- |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 105,327.33 Da | 39.77 | 92.55 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 625 | 891 | 3.6318E-91 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 622 | 888 | 4.9E-46 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 149 | 209 | 1.1E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 269 | 328 | 8.5E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 67 | 8.4E-9 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 39 | 385 | 1.17E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 604 | 924 | 2.13E-77 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 292 | 378 | 1.5E-13 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 590 | 694 | 7.6E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 183 | 291 | 1.5E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 182 | 1.1E-38 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 695 | 902 | 1.4E-58 | - |
| SMART | SM00220 | serkin_6 | 619 | 895 | 1.7E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 619 | 892 | 37.756874 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 625 | 647 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 739 | 751 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_030543826.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Rhodamnia argentea] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8B8Q9L7 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 OS=Rhodamnia argentea OX=178133 GN=LOC115750535 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology