Basic Information
Locus ID:
STRG.14383_chr08_-
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
ATP-dependent DNA helicase Q-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr08 | 30739279 | 30790872 | - | STRG.14383_chr08_- |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.52 | 40,545.76 Da | 41.92 | 87.37 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18794 | SF2_C_RecQ | 119 | 251 | 1.42993E-74 | - |
| Pfam | PF16124 | RecQ zinc-binding | 253 | 334 | 1.2E-14 | IPR032284 |
| Pfam | PF00271 | Helicase conserved C-terminal domain | 137 | 241 | 4.5E-18 | IPR001650 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 117 | 339 | 4.53E-55 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 16 | 113 | 7.98E-13 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 119 | 338 | 1.8E-65 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 1 | 118 | 1.6E-42 | IPR027417 |
| SMART | SM00490 | helicmild6 | 161 | 242 | 2.8E-27 | IPR001650 |
| TIGRFAM | TIGR00614 | recQ_fam: ATP-dependent DNA helicase, RecQ family | 5 | 346 | 2.6E-118 | IPR004589 |
| ProSiteProfiles | PS51192 | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 1 | 111 | 15.356668 | IPR014001 |
| ProSiteProfiles | PS51194 | Superfamilies 1 and 2 helicase C-terminal domain profile. | 133 | 288 | 19.178066 | IPR001650 |
| ProSitePatterns | PS00690 | DEAH-box subfamily ATP-dependent helicases signature. | 50 | 59 | - | IPR002464 |
| Coils | Coil | Coil | 286 | 306 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G10930.1 | DNA helicase (RECQl4A). DNA helicase involved in the maintenance of genome stability by modulation of the DNA damage response and suppression of homologous recombination. | 0 |
| RefSeq | XP_023897078.1 | ATP-dependent DNA helicase Q-like 4A [Quercus suber] | 0 |
| Q8L840 | ATP-dependent DNA helicase Q-like 4A OS=Arabidopsis thaliana OX=3702 GN=RECQL4A PE=2 SV=1 | 0 | |
| TrEMBL | A0A7J9ATH3 | ATP-dependent DNA helicase (Fragment) OS=Gossypium laxum OX=34288 GN=Golax_000286 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology