Basic Information
Locus ID:
STRG.13172_chr07_-
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
RING FYVE PHD zinc finger superfamily protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr07 | 52861790 | 52883078 | - | STRG.13172_chr07_- |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 25,210.76 Da | 61.02 | 73.35 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16495 | RING_CH-C4HC3_MARCH | 108 | 160 | 7.37279E-11 | - |
| Pfam | PF12906 | RING-variant domain | 108 | 159 | 3.6E-9 | IPR011016 |
| SUPERFAMILY | SSF57850 | RING/U-box | 106 | 163 | 7.42E-11 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 94 | 169 | 2.3E-15 | IPR013083 |
| SMART | SM00744 | ringv_2 | 107 | 160 | 4.3E-18 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 100 | 166 | 17.920082 | IPR011016 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 64 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 45 | 59 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G05830.1 | RING/FYVE/PHD zinc finger superfamily protein. | 0 |
| RefSeq | XP_014503725.1 | uncharacterized protein LOC106764040 [Vigna radiata var. radiata] | 0 |
| TrEMBL | A0A5B7AGX7 | RING-CH-type domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_024786 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology