Basic Information
Locus ID:
STRG.13001_chr02_-
Species & Taxonomic ID:
Reaumuria soongarica & 194564
Genome Assembly:
GCA_040143545.1
Description:
Translocase of chloroplast
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 37860642 | 37865325 | - | STRG.13001_chr02_- |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.77 | 133,674.27 Da | 37.86 | 79.68 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 560 | 808 | 4.16591E-130 | - |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 948 | 1211 | 5.2E-126 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 591 | 725 | 2.4E-28 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 578 | 739 | 1.53E-19 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 557 | 808 | 8.4E-57 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 467 | 1213 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 588 | 817 | 32.268173 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 482 | 516 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 388 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 429 | 461 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 354 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 439 | 457 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 844 | 876 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 355 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 484 | 503 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 847 | 869 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16640.1 | multimeric translocon complex in the outer envelope membrane 132. | 0 |
| RefSeq | XP_010647109.1 | PREDICTED: translocase of chloroplast 120, chloroplastic isoform X2 [Vitis vinifera] | 0 |
| Q9SLF3 | Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC132 PE=1 SV=1 | 0 | |
| TrEMBL | A0A438IIY9 | Translocase of chloroplast 120, chloroplastic OS=Vitis vinifera OX=29760 GN=TOC120_0 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology