Basic Information
Locus ID:
SOLCI007445400
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold969 | 66169 | 67837 | + | SOLCI007445400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.32 | 57,881.41 Da | 37.69 | 104.40 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 289 | 474 | 1.1E-21 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 84 | 130 | 9.2E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 47 | 176 | 4.22E-21 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 287 | 491 | 1.3E-39 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 252 | 354 | 8.5E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 356 | 510 | 1.7E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 199 | 9.3E-26 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 280 | 511 | 22.647627 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23740.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_015081594.1 | probably inactive receptor-like protein kinase At5g41680 [Solanum pennellii] | 0 |
| Q9SUQ3 | Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana OX=3702 GN=At4g23740 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2C3A3 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_025551 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 1 | pistato.v30155410 |
| Apiaceae | Apium graveolens | 2 | Ag2G01689, Ag3G00496 |
| Arecaceae | Cocos nucifera | 1 | scaffold000201G000010 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103698808, gene-LOC120109517 |
| Asteraceae | Flaveria trinervia | 1 | Ftri15G00878 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq01G1426 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl01G1597 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-9058 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG05.1974 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_1AG0014450 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_7_RagTag.106, evm.TU.Scaffold_8_RagTag.1618 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-8737 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-398 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-15073 |
| Rhizophoraceae | Kandelia candel | 2 | add.evm.TU.utg000028l.32, evm.TU.utg000018l.48 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-20483 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-23775 |
| Salicaceae | Populus euphratica | 3 | populus_peu17849, populus_peu33589, populus_peu33645 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132617527 |
| Solanaceae | Solanum chilense | 1 | SOLCI007445400 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107025324 |
| Zosteraceae | Zostera marina | 1 | Zosma02g19760.v3.1 |