Basic Information
Locus ID:
SOLCI007399500
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold9538 | 687 | 6162 | - | SOLCI007399500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.05 | 72,672.84 Da | 37.82 | 87.61 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 126 | 186 | 6.9E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 338 | 604 | 1.2E-29 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 337 | 612 | 1.24E-48 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 217 | 3.63E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 200 | 239 | 6.7E-7 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 410 | 634 | 3.3E-39 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 299 | 409 | 3.2E-16 | - |
| Gene3D | G3DSA:1.20.5.930 | - | 240 | 285 | 4.0E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 199 | 6.1E-25 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 334 | 609 | 26.477942 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_004245435.1 | pollen receptor-like kinase 4 [Solanum lycopersicum] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2AXI8 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_025352 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology