Basic Information
Locus ID:
SOLCI007393500
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Belongs to the cysteine synthase cystathionine beta- synthase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold9513 | 19593 | 22725 | + | SOLCI007393500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.72 | 38,018.37 Da | 34.81 | 84.36 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01561 | CBS_like | 39 | 329 | 3.38944E-146 | - |
| Pfam | PF00291 | Pyridoxal-phosphate dependent enzyme | 37 | 321 | 1.6E-66 | IPR001926 |
| SUPERFAMILY | SSF53686 | Tryptophan synthase beta subunit-like PLP-dependent enzymes | 37 | 335 | 7.33E-97 | IPR036052 |
| Gene3D | G3DSA:3.40.50.1100 | - | 72 | 174 | 5.2E-125 | IPR036052 |
| Gene3D | G3DSA:3.40.50.1100 | - | 37 | 329 | 5.2E-125 | IPR036052 |
| TIGRFAM | TIGR01136 | cysKM: cysteine synthase | 37 | 333 | 4.6E-122 | IPR005856 |
| TIGRFAM | TIGR01139 | cysK: cysteine synthase A | 37 | 333 | 5.4E-124 | IPR005859 |
| ProSitePatterns | PS00901 | Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. | 60 | 78 | - | IPR001216 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko00270 (Cysteine and methionine metabolism)
map00270 (Cysteine and methionine metabolism)
ko00460 (Cyanoamino acid metabolism)
map00460 (Cyanoamino acid metabolism)
ko00920 (Sulfur metabolism)
map00920 (Sulfur metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01120 (Microbial metabolism in diverse environments)
map01120 (Microbial metabolism in diverse environments)
ko01200 (Carbon metabolism)
map01200 (Carbon metabolism)
ko01230 (Biosynthesis of amino acids)
map01230 (Biosynthesis of amino acids)
Reaction:
R00897 (O-Acetyl-L-serine + Hydrogen sulfide <=> L-Cysteine + Acetate)
R02846 (Cysteine + Cyanide ion <=> Hydrogen sulfide + 3-Cyano-L-alanine)
R03524 (L-Cysteine + Hydrogen cyanide <=> Hydrogen sulfide + 3-Cyano-L-alanine)
R03601 (O-Acetyl-L-serine + Hydrogen selenide <=> L-Selenocysteine + Acetate)
R04859 (O-Acetyl-L-serine + Thiosulfate + Thioredoxin + H+ <=> L-Cysteine + Sulfite + Thioredoxin disulfide + Acetate)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61440.1 | cysteine synthase C1. Encodes a cysteine synthase isomer CysC1. The isomer is however less effective in cysteine biosynthesis. It is involved in beta-cyanoalanine biosynthesis, an intermediate of cyanide detoxification pathway. | 0 |
| RefSeq | XP_010326974.1 | bifunctional L-3-cyanoalanine synthase/cysteine synthase 1, mitochondrial [Solanum lycopersicum] | 0 |
| Q76MX2 | Bifunctional L-3-cyanoalanine synthase/cysteine synthase 1, mitochondrial OS=Solanum tuberosum OX=4113 GN=PCAS-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2ARQ8 | Cysteine synthase (Fragment) OS=Solanum chilense OX=4083 GN=EJD97_025335 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology