Basic Information
Locus ID:
SOLCI007268900
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Short Name:
WRKY4
Description:
WRKY transcription factor 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold9050 | 31329 | 36336 | - | SOLCI007268900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.66 | 55,451.43 Da | 66.89 | 53.01 | -0.87 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 216 | 272 | 1.2E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 395 | 452 | 1.2E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 386 | 454 | 5.75E-30 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 213 | 274 | 2.88E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 207 | 275 | 6.3E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 379 | 455 | 6.0E-37 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 215 | 273 | 7.5E-38 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 394 | 453 | 2.9E-40 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 210 | 274 | 24.259842 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 389 | 454 | 39.19194 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 265 | 306 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 259 | 366 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 366 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 320 | 342 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_004239088.1 | probable WRKY transcription factor 4 [Solanum lycopersicum] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6N2AQH8 | WRKY transcription factor 3 OS=Solanum chilense OX=4083 GN=EJD97_024899 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology