Basic Information
Locus ID:
SOLCI007210800
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold8852 | 1118 | 3751 | - | SOLCI007210800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.91 | 72,912.42 Da | 32.23 | 89.76 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 336 | 607 | 5.21982E-92 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 45 | 131 | 2.9E-10 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 146 | 240 | 4.0E-11 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 331 | 534 | 6.5E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 315 | 625 | 5.93E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 143 | 243 | 2.4E-15 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 31 | 133 | 6.5E-15 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 406 | 613 | 1.5E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 290 | 405 | 1.3E-32 | - |
| SMART | SM00220 | serkin_6 | 330 | 607 | 5.1E-32 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 32 | 133 | 16.108662 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 138 | 243 | 14.732742 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 330 | 621 | 37.71447 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 451 | 463 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 336 | 358 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70520.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_004228898.1 | cysteine-rich receptor-like protein kinase 2 isoform X1 [Solanum lycopersicum] | 0 |
| Q9CAL3 | Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2ASX5 | Cysteine-rich receptor-like protein kinase 2 OS=Solanum chilense OX=4083 GN=EJD97_024728 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology