Basic Information
Locus ID:
SOLCI006937100
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold7980 | 1626 | 4068 | - | SOLCI006937100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.89 | 78,475.93 Da | 43.29 | 93.71 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 419 | 694 | 1.0E-45 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 45 | 77 | 7.8E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 106 | 165 | 1.9E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 225 | 283 | 5.7E-9 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 410 | 694 | 6.88E-70 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 53 | 319 | 3.32E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 393 | 496 | 3.2E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 497 | 695 | 1.1E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 175 | 5.0E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 248 | 352 | 2.1E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 176 | 247 | 5.0E-18 | IPR032675 |
| SMART | SM00365 | LRR_sd22_2 | 223 | 244 | 110.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 199 | 221 | 550.0 | - |
| SMART | SM00369 | LRR_typ_2 | 104 | 127 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 270 | 294 | 110.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 152 | 183 | 470.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 104 | 125 | 13.0 | - |
| SMART | SM00369 | LRR_typ_2 | 223 | 247 | 21.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 417 | 693 | 5.9E-25 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 128 | 152 | 37.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 106 | 127 | 7.411628 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 130 | 152 | 7.226811 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 225 | 247 | 7.265315 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 417 | 696 | 37.587265 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 550 | 562 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 423 | 446 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 270 | 283 | 1.5E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 107 | 120 | 1.5E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_004245385.4 | LRR receptor-like serine/threonine-protein kinase HSL2 isoform X1 [Solanum lycopersicum] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2ARC1 | Protein kinase domain-containing protein (Fragment) OS=Solanum chilense OX=4083 GN=EJD97_023963 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology