Basic Information
Locus ID:
SOLCI006859400
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Targeting protein for Xklp2 (TPX2)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold784 | 37353 | 42121 | - | SOLCI006859400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.31 | 51,683.32 Da | 50.20 | 58.63 | -0.95 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 244 | 327 | 3.9E-25 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 434 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 215 | 230 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 181 | 234 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 156 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 380 | 408 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 301 | 440 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 82 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32330.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_010322718.1 | protein WVD2-like 6 isoform X2 [Solanum lycopersicum] | 0 |
| Q94C48 | Protein WVD2-like 5 OS=Arabidopsis thaliana OX=3702 GN=WDL5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2CAA8 | TPX2 domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_023760 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology