Basic Information
Locus ID:
SOLCI006857800
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold7838 | 3894 | 6434 | - | SOLCI006857800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.80 | 36,399.51 Da | 40.70 | 117.75 | 0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 9 | 133 | 1.2E-15 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 168 | 307 | 2.1E-18 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 153 | 311 | 1.2E-18 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 5 | 149 | 1.8E-16 | IPR044880 |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 8 | 310 | 7.6E-91 | IPR004798 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 9 | 310 | 4.4E-102 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55730.1 | cation exchanger 5. member of Low affinity calcium antiporter CAX2 family | 0 |
| RefSeq | XP_049374219.1 | vacuolar cation/proton exchanger 5-like isoform X2 [Solanum verrucosum] | 0 |
| Q8L783 | Vacuolar cation/proton exchanger 5 OS=Arabidopsis thaliana OX=3702 GN=CAX5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2ATP1 | Vacuolar cation/proton exchanger (Fragment) OS=Solanum chilense OX=4083 GN=EJD97_023754 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology