Basic Information
Locus ID:
SOLCI006814000
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Ribosomal protein S10p/S20e
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold775 | 130509 | 132395 | - | SOLCI006814000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.73 | 9,520.92 Da | 43.59 | 92.82 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00338 | Ribosomal protein S10p/S20e | 40 | 81 | 1.1E-8 | IPR027486 |
| SUPERFAMILY | SSF54999 | Ribosomal protein S10 | 23 | 82 | 9.68E-12 | IPR036838 |
| Gene3D | G3DSA:3.30.70.600 | Ribosomal protein S10 domain | 3 | 85 | 2.1E-18 | IPR036838 |
| SMART | SM01403 | Ribosomal_S10_2 | 25 | 81 | 0.0044 | IPR027486 |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47370.1 | Ribosomal protein S10p/S20e family protein. | 0 |
| RefSeq | XP_004230042.1 | 40S ribosomal protein S20-2 [Solanum lycopersicum] | 0 |
| Q9STY6 | Small ribosomal subunit protein uS10y OS=Arabidopsis thaliana OX=3702 GN=RPS20B PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2CA62 | Ribosomal_S10 domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_023678 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology