Basic Information
Locus ID:
SOLCI006810400
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Short Name:
CERK1
Description:
Chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold7743 | 1501 | 8343 | + | SOLCI006810400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 68,489.92 Da | 33.29 | 93.55 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 330 | 597 | 1.1E-45 | IPR001245 |
| Pfam | PF01476 | LysM domain | 48 | 89 | 0.012 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 305 | 598 | 2.02E-75 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 399 | 609 | 3.9E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 304 | 398 | 1.8E-26 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 168 | 215 | 2.0E-5 | IPR036779 |
| SMART | SM00257 | LysM_2 | 170 | 214 | 0.69 | IPR018392 |
| SMART | SM00220 | serkin_6 | 328 | 600 | 7.6E-38 | IPR000719 |
| SMART | SM00257 | LysM_2 | 42 | 89 | 0.42 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 328 | 601 | 38.915863 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 443 | 455 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 334 | 356 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | NP_001233773.1 | LysM receptor-like kinase isoform 1 precursor [Solanum lycopersicum] | 0 |
| A0A0P0XII1 | Chitin elicitor receptor kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2ATV2 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_023656 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology