Basic Information
Locus ID:
SOLCI006785600
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
isoform X1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold77 | 179541 | 190240 | + | SOLCI006785600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.82 | 102,116.94 Da | 56.10 | 62.26 | -1.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 676 | 717 | 3.84E-6 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 43 | 247 | 4.8E-10 | IPR016024 |
| Gene3D | G3DSA:2.30.30.140 | - | 669 | 725 | 2.2E-10 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 17 | 285 | 1.2E-5 | IPR011989 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 351 | 399 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 491 | 558 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 832 | 887 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 623 | 641 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 459 | 473 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 593 | 614 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 747 | 792 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 400 | 415 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 443 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 283 | 311 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 567 | 583 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 902 | 916 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 801 | 819 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 917 | 933 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 305 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 730 | 940 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 642 | 664 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 351 | 671 | - | - |
| Coils | Coil | Coil | 26 | 46 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_004241799.1 | muscle M-line assembly protein unc-89 [Solanum lycopersicum] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2CK85 | Neurofilament heavy polypeptide-like OS=Solanum chilense OX=4083 GN=EJD97_023576 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology