Basic Information
Locus ID:
SOLCI006711400
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Kelch motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold7557 | 4329 | 5363 | + | SOLCI006711400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 38,296.90 Da | 49.75 | 67.70 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 157 | 203 | 5.5E-13 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 114 | 155 | 1.4E-8 | IPR006652 |
| Pfam | PF00646 | F-box domain | 12 | 50 | 1.2E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 9 | 58 | 1.14E-8 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 82 | 271 | 2.09E-39 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 47 | 300 | 2.3E-38 | IPR015915 |
| Gene3D | G3DSA:1.20.1280.50 | - | 12 | 46 | 1.7E-5 | - |
| SMART | SM00256 | fbox_2 | 13 | 53 | 1.2E-4 | IPR001810 |
| SMART | SM00612 | kelc_smart | 169 | 216 | 8.7E-6 | IPR006652 |
| SMART | SM00612 | kelc_smart | 120 | 168 | 1.0E-7 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15670.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_004249296.1 | F-box/kelch-repeat protein At1g15670 [Solanum lycopersicum] | 0 |
| Q9LMR5 | F-box/kelch-repeat protein At1g15670 OS=Arabidopsis thaliana OX=3702 GN=At1g15670 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2AWB8 | F-box domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_023318 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology