Basic Information
Locus ID:
SOLCI006697500
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Prolyl 4-hydroxylase alpha subunit homologues.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold7533 | 7868 | 11088 | + | SOLCI006697500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.29 | 32,769.02 Da | 52.38 | 79.08 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13640 | 2OG-Fe(II) oxygenase superfamily | 168 | 286 | 7.3E-21 | IPR044862 |
| Gene3D | G3DSA:2.60.120.620 | q2cbj1_9rhob like domain | 81 | 287 | 1.9E-80 | - |
| SMART | SM00702 | p4hc | 88 | 286 | 5.6E-68 | IPR006620 |
| ProSiteProfiles | PS51471 | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 164 | 287 | 12.40233 | IPR005123 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G20270.1 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. | 0 |
| RefSeq | XP_004238387.1 | probable prolyl 4-hydroxylase 3 [Solanum lycopersicum] | 0 |
| Q9LN20 | Probable prolyl 4-hydroxylase 3 OS=Arabidopsis thaliana OX=3702 GN=P4H3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2AUC8 | Fe2OG dioxygenase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_023275 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology