Basic Information
Locus ID:
SOLCI006618200
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
domain in TBC and LysM domain containing proteins
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold7387 | 4144 | 8313 | + | SOLCI006618200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 43,898.59 Da | 42.94 | 76.16 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07534 | TLD | 238 | 375 | 8.1E-29 | IPR006571 |
| SMART | SM00584 | 109ultra | 212 | 376 | 1.1E-27 | IPR006571 |
| ProSiteProfiles | PS51886 | TLDc domain profile. | 213 | 376 | 25.697826 | IPR006571 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 115 | 142 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 108 | 146 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 28 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 68 | 82 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G39870.1 | TLD-domain containing nucleolar protein. | 0 |
| RefSeq | XP_004237393.1 | uncharacterized protein LOC101259832 [Solanum lycopersicum] | 0 |
| B4F6Q9 | Oxidation resistance protein 1 OS=Xenopus laevis OX=8355 GN=oxr1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6N2AVA1 | TLDc domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_023027 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology