Basic Information
Locus ID:
SOLCI006585800
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Di-glucose binding within endoplasmic reticulum
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold7322 | 9687 | 18392 | + | SOLCI006585800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 111,487.48 Da | 37.81 | 93.33 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11721 | Malectin domain | 466 | 648 | 5.3E-28 | IPR021720 |
| Pfam | PF00069 | Protein kinase domain | 714 | 969 | 4.5E-36 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 367 | 387 | 0.56 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 121 | 178 | 9.3E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 697 | 974 | 3.64E-62 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 84 | 408 | 3.4E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 327 | 451 | 4.4E-19 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 790 | 987 | 2.7E-40 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 465 | 654 | 3.8E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 212 | 326 | 9.3E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 61 | 211 | 4.4E-34 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 685 | 787 | 3.2E-30 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 713 | 984 | 33.898293 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 719 | 742 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53440.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_010317417.1 | probable LRR receptor-like serine/threonine-protein kinase At1g53420 isoform X1 [Solanum lycopersicum] | 0 |
| C0LGG9 | Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana OX=3702 GN=At1g53440 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6N2AT17 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_022935 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Salicaceae | Populus euphratica | 1 | populus_peu09879 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132616834, gene-LOC132618246 |
| Solanaceae | Solanum chilense | 1 | SOLCI006585800 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107014596 |