Basic Information
Locus ID:
SOLCI006566300
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold7294 | 24930 | 28712 | + | SOLCI006566300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.96 | 101,915.46 Da | 36.72 | 83.64 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 594 | 867 | 1.4071E-94 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 64 | 0.0013 | IPR013210 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 392 | 436 | 7.0E-7 | IPR025875 |
| Pfam | PF00069 | Protein kinase domain | 589 | 862 | 5.7E-48 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 328 | 366 | 9.1E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 46 | 436 | 8.84E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 567 | 874 | 1.43E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 552 | 665 | 3.7E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 327 | 9.9E-81 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 329 | 453 | 3.4E-33 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 666 | 884 | 1.1E-55 | - |
| SMART | SM00220 | serkin_6 | 588 | 868 | 1.1E-44 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 588 | 867 | 40.074848 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 713 | 725 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 594 | 616 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 915 | 940 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 453 | 476 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_004230827.1 | receptor protein kinase TMK1-like isoform X1 [Solanum lycopersicum] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2AV61 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_022862 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology