Basic Information
Locus ID:
SOLCI006550400
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold7266 | 15604 | 20618 | - | SOLCI006550400 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.87 | 84,150.07 Da | 52.96 | 76.55 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 103 | 192 | 7.84034E-11 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 486 | 732 | 2.48643E-127 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 481 | 731 | 3.7E-67 | IPR001245 |
| Pfam | PF13426 | PAS domain | 102 | 192 | 4.7E-11 | IPR000014 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 84 | 192 | 2.27E-15 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 457 | 729 | 1.62E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 80 | 213 | 3.5E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 559 | 738 | 8.1E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 473 | 558 | 8.6E-28 | - |
| SMART | SM00091 | pas_2 | 82 | 149 | 1.5E-6 | IPR000014 |
| SMART | SM00220 | serkin_6 | 480 | 736 | 1.5E-57 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 84 | 192 | 9.1E-13 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 480 | 737 | 42.378693 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 80 | 126 | 11.648568 | IPR000014 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 599 | 611 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 486 | 507 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 659 | 681 | 6.0E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 703 | 725 | 6.0E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 593 | 611 | 6.0E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 554 | 567 | 6.0E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 640 | 650 | 6.0E-14 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 433 | 463 | - | - |
| Coils | Coil | Coil | 35 | 55 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23050.2 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_019070734.1 | probable serine/threonine-protein kinase DDB_G0278509 isoform X2 [Solanum lycopersicum] | 0 |
| Q9FPR3 | Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana OX=3702 GN=EDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2AV94 | Serine/threonine-protein kinase CTR1 OS=Solanum chilense OX=4083 GN=EJD97_022793 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology