Basic Information
Locus ID:
SOLCI006550100
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Ring finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold72659 | 265 | 951 | - | SOLCI006550100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.45 | 22,307.75 Da | 53.79 | 78.92 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF57850 | RING/U-box | 111 | 177 | 2.27E-6 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 109 | 187 | 4.2E-8 | IPR013083 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_049365501.1 | uncharacterized protein LOC125830357 [Solanum verrucosum] | 0 |
| TrEMBL | A0A6N2AD46 | RING-type domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_022791 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 1 | gene-LOC132631546 |
| Solanaceae | Solanum chilense | 1 | SOLCI006550100 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC114075312 |