Basic Information
Locus ID:
SOLCI006485500
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Short Name:
NHX1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold714 | 251634 | 256104 | + | SOLCI006485500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.24 | 58,826.38 Da | 36.21 | 111.53 | 0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 29 | 442 | 1.1E-54 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 146 | 197 | 3.1E-14 | - |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 24 | 448 | 2.5E-77 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 98 | 112 | 9.9E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 153 | 163 | 9.9E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 84 | 95 | 9.9E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 113 | 121 | 9.9E-11 | IPR004709 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 453 | 467 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 453 | 484 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05030.1 | sodium hydrogen exchanger 2. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_010324159.1 | (Sodium/potassium)/proton exchanger 4 isoform X1 [Solanum lycopersicum] | 0 |
| Q56XP4 | Sodium/hydrogen exchanger 2 OS=Arabidopsis thaliana OX=3702 GN=NHX2 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6N2C6E5 | Sodium/hydrogen exchanger OS=Solanum chilense OX=4083 GN=EJD97_022605 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology