Basic Information
Locus ID:
SOLCI006105000
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold6521 | 25743 | 27041 | - | SOLCI006105000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.06 | 49,242.02 Da | 59.06 | 85.05 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 182 | 418 | 8.1E-23 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 152 | 423 | 5.12E-32 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 152 | 431 | 6.9E-29 | - |
| SMART | SM00220 | serkin_6 | 116 | 418 | 1.3E-10 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 116 | 418 | 22.393215 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14480.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_004248629.1 | serine/threonine-protein kinase BLUS1-like [Solanum lycopersicum] | 0 |
| O23304 | Serine/threonine-protein kinase BLUS1 OS=Arabidopsis thaliana OX=3702 GN=BLUS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2AXN4 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_021417 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg18682, jg1869, jg8331 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30003640 |
| Apiaceae | Apium graveolens | 2 | Ag2G02557, AgUnG00499 |
| Solanaceae | Lycium barbarum | 5 | gene-LOC132613084, gene-LOC132613089, gene-LOC132613094 ... |
| Solanaceae | Solanum chilense | 5 | SOLCI000552200, SOLCI001268300, SOLCI001371800 ... |
| Solanaceae | Solanum pennellii | 7 | gene-LOC107019742, gene-LOC107032678, gene-LOC107032679 ... |