Basic Information
Locus ID:
SOLCI005911700
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Phosphatidylinositol 4-kinase gamma 3-like isoform X1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold6189 | 93593 | 95771 | + | SOLCI005911700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 64,244.63 Da | 38.16 | 88.22 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17039 | Ubl_ubiquitin_like | 112 | 181 | 8.05368E-10 | - |
| Pfam | PF00240 | Ubiquitin family | 112 | 184 | 2.6E-9 | IPR000626 |
| Pfam | PF00454 | Phosphatidylinositol 3- and 4-kinase | 273 | 527 | 3.1E-54 | IPR000403 |
| Pfam | PF00240 | Ubiquitin family | 37 | 106 | 1.8E-16 | IPR000626 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 34 | 107 | 1.36E-16 | IPR029071 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 387 | 576 | 6.43E-7 | IPR011009 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 106 | 184 | 6.68E-14 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 112 | 199 | 2.4E-11 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 31 | 111 | 2.2E-15 | - |
| SMART | SM00213 | ubq_7 | 110 | 183 | 0.53 | IPR000626 |
| SMART | SM00213 | ubq_7 | 34 | 105 | 3.7E-9 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 110 | 187 | 13.314867 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 34 | 105 | 14.490739 | IPR000626 |
| PRINTS | PR00348 | Ubiquitin signature | 86 | 107 | 8.9E-6 | IPR019956 |
| PRINTS | PR00348 | Ubiquitin signature | 43 | 63 | 8.9E-6 | IPR019956 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G24240.1 | Phosphatidylinositol 3- and 4-kinase ;Ubiquitin family protein. | 0 |
| RefSeq | XP_015069899.1 | phosphatidylinositol 4-kinase gamma 3 [Solanum pennellii] | 0 |
| Q9FNF8 | Phosphatidylinositol 4-kinase gamma 3 OS=Arabidopsis thaliana OX=3702 GN=PI4KG3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2AYH2 | 1-phosphatidylinositol 4-kinase OS=Solanum chilense OX=4083 GN=EJD97_020912 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology