Basic Information
Locus ID:
SOLCI005775700
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold5951 | 18056 | 19402 | + | SOLCI005775700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 48,304.86 Da | 42.89 | 83.33 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 96 | 445 | 2.10623E-88 | IPR034161 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 295 | 441 | 6.2E-25 | IPR032799 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 97 | 273 | 1.7E-53 | IPR032861 |
| SUPERFAMILY | SSF50630 | Acid proteases | 94 | 445 | 3.25E-88 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 70 | 270 | 5.0E-55 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 271 | 448 | 4.9E-47 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 97 | 441 | 44.457531 | IPR033121 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 23 | 6.0 | - |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 326 | 337 | - | IPR001969 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_004244685.1 | aspartic proteinase CDR1 [Solanum lycopersicum] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2AZH7 | Peptidase A1 domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_020455 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology