Basic Information
Locus ID:
SOLCI005760000
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Targeting protein for Xklp2 (TPX2)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold5922 | 38547 | 41243 | - | SOLCI005760000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.84 | 50,431.18 Da | 55.41 | 55.82 | -1.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 253 | 336 | 3.7E-24 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 409 | 437 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 335 | 384 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 467 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 252 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 143 | 209 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 51 | 114 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 210 | 234 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 393 | 407 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 121 | 142 | - | - |
| Coils | Coil | Coil | 20 | 43 | - | - |
| Coils | Coil | Coil | 261 | 303 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_015062505.1 | protein WVD2-like 4 [Solanum pennellii] | 0 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6N2AZE2 | TPX2 domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_020406 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology