Basic Information
Locus ID:
SOLCI005736500
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
receptor protein kinase TMK1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold5890 | 24093 | 27424 | + | SOLCI005736500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 100,272.50 Da | 41.81 | 88.00 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 580 | 853 | 1.11729E-96 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 577 | 844 | 1.5E-47 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 367 | 421 | 2.7E-6 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 548 | 850 | 3.06E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 430 | 1.87E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 320 | 445 | 5.6E-29 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 652 | 872 | 2.8E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 537 | 651 | 4.8E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 22 | 316 | 4.7E-66 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 408 | 430 | 59.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 107 | 130 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 384 | 407 | 100.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 574 | 854 | 5.8E-42 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 84 | 106 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 181 | 204 | 20.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 574 | 854 | 41.219704 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 580 | 602 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 699 | 711 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 451 | 471 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 899 | 921 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006349904.1 | PREDICTED: receptor-like kinase TMK4 [Solanum tuberosum] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2B0D8 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_020324 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology