Basic Information
Locus ID:
SOLCI005645200
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Cytosolic domain of 10TM putative phosphate transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold5743 | 6733 | 14588 | - | SOLCI005645200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.93 | 81,061.79 Da | 44.62 | 111.36 | 0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13967 | Late exocytosis, associated with Golgi transport | 6 | 166 | 2.2E-40 | IPR032880 |
| Pfam | PF14703 | Cytosolic domain of 10TM putative phosphate transporter | 188 | 343 | 1.8E-34 | IPR027815 |
| Pfam | PF02714 | Calcium-dependent channel, 7TM region, putative phosphate | 356 | 621 | 8.6E-70 | IPR003864 |
| Coils | Coil | Coil | 275 | 295 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01100.1 | hypothetical protein 1. unknown protein, has cDNAs and ESTs associated to it | 0 |
| RefSeq | XP_015066622.1 | CSC1-like protein HYP1 isoform X1 [Solanum pennellii] | 0 |
| Q8GUH7 | CSC1-like protein HYP1 OS=Arabidopsis thaliana OX=3702 GN=HYP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2AXT8 | CSC1-like protein HYP1 OS=Solanum chilense OX=4083 GN=EJD97_020036 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology