Basic Information
Locus ID:
SOLCI005588100
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold5658 | 1760 | 4346 | + | SOLCI005588100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.89 | 45,357.36 Da | 44.69 | 94.27 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14733 | BACK | 194 | 254 | 2.20274E-5 | - |
| Pfam | PF02135 | TAZ zinc finger | 276 | 361 | 3.5E-13 | IPR000197 |
| Pfam | PF00651 | BTB/POZ domain | 84 | 190 | 5.6E-11 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 81 | 190 | 2.04E-15 | IPR011333 |
| SUPERFAMILY | SSF57933 | TAZ domain | 269 | 368 | 4.05E-22 | IPR035898 |
| Gene3D | G3DSA:1.20.1020.10 | TAZ domain | 269 | 390 | 1.8E-23 | IPR035898 |
| Gene3D | G3DSA:1.25.40.420 | - | 193 | 268 | 5.1E-13 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 74 | 191 | 5.8E-19 | IPR011333 |
| SMART | SM00551 | TAZ_2 | 269 | 362 | 9.8E-36 | IPR000197 |
| SMART | SM00225 | BTB_4 | 92 | 192 | 7.4E-10 | IPR000210 |
| ProSiteProfiles | PS50134 | Zinc finger TAZ-type profile. | 266 | 364 | 9.290867 | IPR000197 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 92 | 153 | 10.447455 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G05690.1 | BTB and TAZ domain protein 3. BTB and TAZ domain protein. Acts redunantly with BT1 and BT2 during female gametophyte development. Acts with BT2 during male gametophyte development. | 0 |
| RefSeq | XP_004244768.1 | BTB/POZ and TAZ domain-containing protein 3 [Solanum lycopersicum] | 0 |
| Q9SYL0 | BTB/POZ and TAZ domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BT3 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6N2B0E2 | BTB domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_019836 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology