Basic Information
Locus ID:
SOLCI005578500
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
WRKY transcription factor 3
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold5640 | 13101 | 15470 | + | SOLCI005578500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.25 | 50,995.12 Da | 56.58 | 58.49 | -0.75 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 216 | 271 | 9.8E-22 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 385 | 442 | 1.0E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 213 | 273 | 1.83E-23 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 376 | 444 | 1.31E-29 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 204 | 274 | 1.6E-25 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 369 | 445 | 4.7E-35 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 214 | 272 | 1.5E-32 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 384 | 443 | 3.9E-39 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 379 | 444 | 35.645424 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 216 | 273 | 22.653006 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 202 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G03340.1 | WRKY DNA-binding protein 3. Encodes WRKY DNA-binding protein 3 (WRKY3). | 0 |
| RefSeq | NP_001334317.1 | WRKY transcription factor 3 [Solanum lycopersicum] | 0 |
| Q9ZQ70 | Probable WRKY transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=WRKY3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2B2M6 | WRKY domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_019796 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology