Basic Information
Locus ID:
SOLCI005526000
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Major Facilitator Superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold5564 | 14434 | 19154 | - | SOLCI005526000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.55 | 47,498.83 Da | 37.72 | 107.63 | 0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 10 | 418 | 1.10563E-58 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 10 | 378 | 2.4E-28 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 10 | 418 | 7.85E-40 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 7 | 416 | 3.2E-42 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 6 | 424 | 11.420027 | IPR020846 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 18 | 5.0 | - |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 302 | 323 | 1.5E-7 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 50 | 69 | 1.5E-7 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 362 | 385 | 1.5E-7 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 327 | 347 | 1.5E-7 | IPR001958 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_015071993.1 | uncharacterized protein LOC107016032 [Solanum pennellii] | 0 |
| Q5SR56 | Hippocampus abundant transcript-like protein 1 OS=Homo sapiens OX=9606 GN=MFSD14B PE=1 SV=3 | 0 | |
| TrEMBL | A0A6N2AZI3 | MFS domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_019624 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology