Basic Information
Locus ID:
SOLCI005417600
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
bHLH-MYC and R2R3-MYB transcription factors N-terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold5409 | 51830 | 53197 | + | SOLCI005417600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 49,925.64 Da | 35.86 | 85.67 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 27 | 216 | 2.6E-50 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 281 | 327 | 6.2E-11 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 280 | 338 | 1.14E-17 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 272 | 342 | 3.8E-16 | IPR036638 |
| SMART | SM00353 | finulus | 283 | 332 | 1.1E-16 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 277 | 326 | 17.218485 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 348 | 365 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 249 | 274 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 346 | 365 | - | - |
| Coils | Coil | Coil | 316 | 343 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00870.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein. | 0 |
| RefSeq | XP_004230021.1 | transcription factor MYC2-like isoform X1 [Solanum lycopersicum] | 0 |
| O23090 | Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2B2N5 | BHLH domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_019238 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology