Basic Information
Locus ID:
SOLCI005384800
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold5366 | 4099 | 8231 | + | SOLCI005384800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.26 | 69,086.53 Da | 35.49 | 92.97 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12087 | TM_EGFR-like | 231 | 265 | 7.94925E-4 | - |
| Pfam | PF13855 | Leucine rich repeat | 118 | 177 | 9.5E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 300 | 566 | 3.1E-45 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 66 | 1.6E-10 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 191 | 1.21E-31 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 276 | 569 | 2.0E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 376 | 588 | 2.4E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 208 | 3.8E-49 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 268 | 375 | 2.5E-37 | - |
| SMART | SM00220 | serkin_6 | 299 | 568 | 6.6E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 299 | 578 | 36.400009 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 305 | 327 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 418 | 430 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 585 | 602 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 579 | 602 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25560.1 | NSP-interacting kinase 2. | 0 |
| RefSeq | XP_004236956.1 | protein NSP-INTERACTING KINASE 2 [Solanum lycopersicum] | 0 |
| Q8RY65 | Protein NSP-INTERACTING KINASE 2 OS=Arabidopsis thaliana OX=3702 GN=NIK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2AZL1 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_019136 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology