Basic Information
Locus ID:
SOLCI005351500
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
BTB POZ domain-containing protein POB1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold5316 | 70392 | 77752 | - | SOLCI005351500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.29 | 62,543.32 Da | 52.50 | 78.67 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 156 | 222 | 9.37399E-11 | - |
| Pfam | PF07707 | BTB And C-terminal Kelch | 262 | 354 | 2.9E-11 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 153 | 237 | 6.4E-13 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 152 | 237 | 1.33E-11 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 438 | 549 | 5.69E-6 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 272 | 377 | 1.9E-15 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 128 | 271 | 4.8E-16 | IPR011333 |
| SMART | SM00225 | BTB_4 | 114 | 239 | 2.3E-5 | IPR000210 |
| SMART | SM00875 | BACK_2 | 254 | 356 | 6.5E-10 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 139 | 208 | 12.722475 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.1 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_015056154.1 | BTB/POZ domain-containing protein POB1-like isoform X4 [Solanum pennellii] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6N2AZV1 | BTB domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_019039 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology