Basic Information
Locus ID:
SOLCI005301700
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold5251 | 15170 | 18302 | + | SOLCI005301700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 111,462.43 Da | 28.15 | 104.20 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 64 | 1.2E-9 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 704 | 973 | 1.2E-45 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 476 | 536 | 3.1E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 261 | 320 | 1.4E-7 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 248 | 591 | 2.98E-69 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 62 | 346 | 1.49E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 694 | 976 | 1.62E-69 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 229 | 326 | 4.9E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 139 | 228 | 1.5E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 138 | 2.1E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 327 | 622 | 1.1E-79 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 702 | 784 | 4.0E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 785 | 989 | 1.9E-57 | - |
| SMART | SM00369 | LRR_typ_2 | 90 | 113 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 114 | 138 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 331 | 355 | 250.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 702 | 976 | 7.0E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 283 | 307 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 475 | 498 | 320.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 547 | 571 | 340.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 187 | 211 | 18.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 285 | 308 | 7.634948 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 702 | 983 | 37.785141 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 827 | 839 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 708 | 732 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 286 | 299 | 2.4E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 547 | 560 | 2.4E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08590.1 | Leucine-rich receptor-like protein kinase family protein. similar to CLV1-like leucine rich repeat transmembrane receptor-like protein kinase (Ipomoea nil) (U77888) | 0 |
| RefSeq | XP_004237515.1 | leucine-rich repeat receptor-like protein kinase PXL1 [Solanum lycopersicum] | 0 |
| Q9FRS6 | Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana OX=3702 GN=PXL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2B051 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_018870 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology