Basic Information
Locus ID:
SOLCI005229000
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Nascent polypeptide-associated complex subunit alpha-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold5145 | 7608 | 11034 | - | SOLCI005229000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.39 | 21,747.84 Da | 55.36 | 78.39 | -0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14415 | UBA_NACA_NACP1 | 153 | 198 | 8.62635E-17 | - |
| Pfam | PF01849 | NAC domain | 61 | 116 | 2.0E-23 | IPR002715 |
| Pfam | PF19026 | HYPK UBA domain | 159 | 197 | 9.0E-12 | IPR044034 |
| Gene3D | G3DSA:1.10.8.10 | - | 160 | 197 | 1.6E-18 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 67 | 120 | 4.5E-32 | IPR038187 |
| SMART | SM01407 | NAC_2 | 61 | 117 | 4.3E-27 | IPR002715 |
| PIRSF | PIRSF015901 | NAC_alpha | 27 | 199 | 3.4E-62 | IPR016641 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 58 | 123 | 18.061785 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 68 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_004249331.1 | nascent polypeptide-associated complex subunit alpha-like protein 1 [Solanum lycopersicum] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2B4X1 | NAC-A/B domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_018657 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology