Basic Information
Locus ID:
SOLCI005204300
Species & Taxonomic ID:
Solanum chilense & 4083
Genome Assembly:
GCA_006013705.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| scaffold5108 | 22582 | 25362 | - | SOLCI005204300 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 57,788.21 Da | 46.23 | 86.43 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 383 | 454 | 3.1E-20 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 46 | 365 | 1.4E-73 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 46 | 365 | 9.58E-78 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 376 | 492 | 1.5E-11 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 45 | 372 | 6.9E-105 | - |
| SMART | SM00768 | X8_cls | 382 | 467 | 1.1E-48 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 280 | 293 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.2 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_004232702.1 | glucan endo-1,3-beta-glucosidase 1 [Solanum lycopersicum] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 | |
| TrEMBL | A0A6N2B526 | X8 domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_018579 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology